data_GDZ
#

_chem_comp.id                                   GDZ
_chem_comp.name                                 "2-(8-fluoranyl-2-methyl-imidazo[1,2-a]pyridin-6-yl)-7-(4-methylpiperazin-1-yl)pyrido[1,2-a]pyrimidin-4-one"
_chem_comp.type                                 NON-POLYMER
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C21 H21 F N6 O"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        SMN-C5
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2018-09-12
_chem_comp.pdbx_modified_date                   2021-03-01
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       392.429
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    GDZ
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       6HMO
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 EBI
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
GDZ  C24   C1   C  0  1  N  N  N   7.764  -18.664  11.017   5.666   1.524  -0.719  C24   GDZ   1  
GDZ  C23   C2   C  0  1  N  N  N   8.333  -17.956  12.251   6.767   1.570   0.345  C23   GDZ   2  
GDZ  N28   N1   N  0  1  N  N  N   9.036  -18.893  13.150   7.513   0.304   0.330  N28   GDZ   3  
GDZ  C29   C3   C  0  1  N  N  N   9.573  -18.187  14.325   8.684   0.372   1.214  C29   GDZ   4  
GDZ  C27   C4   C  0  1  N  N  N   8.115  -19.973  13.569   6.648  -0.828   0.688  C27   GDZ   5  
GDZ  C26   C5   C  0  1  N  N  N   7.552  -20.736  12.367   5.541  -0.973  -0.362  C26   GDZ   6  
GDZ  N25   N2   N  0  1  N  N  N   6.928  -19.823  11.389   4.851   0.319  -0.495  N25   GDZ   7  
GDZ  C13   C6   C  0  1  N  N  N   5.716  -20.053  10.859   3.456   0.401  -0.411  C13   GDZ   8  
GDZ  C14   C7   C  0  1  N  N  N   4.722  -19.023  10.806   2.713  -0.733  -0.337  C14   GDZ   9  
GDZ  C12   C8   C  0  1  N  N  N   5.367  -21.309  10.352   2.825   1.659  -0.397  C12   GDZ  10  
GDZ  C17   C9   C  0  1  N  N  N   4.080  -21.537   9.860   1.468   1.727  -0.315  C17   GDZ  11  
GDZ  C16   C10  C  0  1  N  N  N   3.111  -20.523   9.877   0.715   0.539  -0.245  C16   GDZ  12  
GDZ  N18   N3   N  0  1  N  N  N   1.905  -20.899   9.401  -0.612   0.611  -0.165  N18   GDZ  13  
GDZ  N15   N4   N  0  1  N  N  N   3.438  -19.248  10.371   1.353  -0.670  -0.255  N15   GDZ  14  
GDZ  C21   C11  C  0  1  N  N  N   2.422  -18.316  10.388   0.639  -1.814  -0.188  C21   GDZ  15  
GDZ  O22   O1   O  0  1  N  N  N   2.661  -17.193  10.829   1.203  -2.897  -0.196  O22   GDZ  16  
GDZ  C20   C12  C  0  1  N  N  N   1.126  -18.673   9.900  -0.752  -1.743  -0.108  C20   GDZ  17  
GDZ  C19   C13  C  0  1  N  N  N   0.897  -20.004   9.418  -1.361  -0.488  -0.097  C19   GDZ  18  
GDZ  C1    C14  C  0  1  Y  N  N  -0.394  -20.453   8.952  -2.836  -0.378  -0.008  C1    GDZ  19  
GDZ  C7    C15  C  0  1  Y  N  N  -1.467  -19.630   9.002  -3.427   0.849   0.004  C7    GDZ  20  
GDZ  C2    C16  C  0  1  Y  N  N  -0.585  -21.779   8.416  -3.629  -1.548   0.058  C2    GDZ  21  
GDZ  C3    C17  C  0  1  Y  N  N  -1.846  -22.208   7.963  -4.982  -1.438   0.134  C3    GDZ  22  
GDZ  F4    F1   F  0  1  N  N  N  -2.014  -23.443   7.468  -5.753  -2.545   0.193  F4    GDZ  23  
GDZ  C5    C18  C  0  1  Y  N  N  -2.926  -21.312   8.047  -5.574  -0.155   0.145  C5    GDZ  24  
GDZ  N11   N5   N  0  1  Y  N  N  -4.280  -21.463   7.682  -6.837   0.240   0.210  N11   GDZ  25  
GDZ  N6    N6   N  0  1  Y  N  N  -2.680  -20.068   8.570  -4.783   0.962   0.085  N6    GDZ  26  
GDZ  C8    C19  C  0  1  Y  N  N  -3.865  -19.376   8.587  -5.618   2.047   0.112  C8    GDZ  27  
GDZ  C9    C20  C  0  1  Y  N  N  -4.860  -20.236   8.048  -6.881   1.574   0.189  C9    GDZ  28  
GDZ  C10   C21  C  0  1  N  N  N  -6.319  -19.923   7.882  -8.132   2.414   0.245  C10   GDZ  29  
GDZ  H24B  H1   H  0  0  N  N  N   8.598  -19.013  10.390   5.038   2.411  -0.635  H24B  GDZ  30  
GDZ  H24A  H2   H  0  0  N  N  N   7.151  -17.950  10.448   6.116   1.482  -1.710  H24A  GDZ  31  
GDZ  H23A  H3   H  0  0  N  N  N   9.041  -17.181  11.921   7.447   2.395   0.130  H23A  GDZ  32  
GDZ  H23B  H4   H  0  0  N  N  N   7.506  -17.486  12.804   6.318   1.716   1.328  H23B  GDZ  33  
GDZ  H29A  H6   H  0  0  N  N  N  10.091  -18.904  14.979   8.358   0.573   2.234  H29A  GDZ  34  
GDZ  H29C  H7   H  0  0  N  N  N  10.282  -17.413  13.995   9.217  -0.578   1.184  H29C  GDZ  35  
GDZ  H29B  H8   H  0  0  N  N  N   8.747  -17.716  14.879   9.345   1.171   0.880  H29B  GDZ  36  
GDZ  H27A  H9   H  0  0  N  N  N   7.281  -19.531  14.133   7.240  -1.742   0.720  H27A  GDZ  37  
GDZ  H27B  H10  H  0  0  N  N  N   8.661  -20.677  14.214   6.201  -0.649   1.666  H27B  GDZ  38  
GDZ  H26A  H11  H  0  0  N  N  N   6.795  -21.452  12.721   5.979  -1.254  -1.320  H26A  GDZ  39  
GDZ  H26B  H12  H  0  0  N  N  N   8.371  -21.281  11.875   4.833  -1.738  -0.045  H26B  GDZ  40  
GDZ  H14   H13  H  0  1  N  N  N   4.993  -18.026  11.122   3.204  -1.695  -0.343  H14   GDZ  41  
GDZ  H12   H14  H  0  1  N  N  N   6.096  -22.106  10.341   3.412   2.563  -0.451  H12   GDZ  42  
GDZ  H17   H15  H  0  1  N  N  N   3.827  -22.508   9.461   0.971   2.686  -0.308  H17   GDZ  43  
GDZ  H20   H16  H  0  1  N  N  N   0.327  -17.947   9.895  -1.346  -2.643  -0.054  H20   GDZ  44  
GDZ  H7    H18  H  0  1  N  N  N  -1.360  -18.626   9.385  -2.817   1.738  -0.051  H7    GDZ  45  
GDZ  H2    H19  H  0  1  N  N  N   0.256  -22.455   8.362  -3.163  -2.523   0.049  H2    GDZ  46  
GDZ  H8    H20  H  0  1  N  N  N  -4.014  -18.367   8.943  -5.323   3.085   0.080  H8    GDZ  47  
GDZ  H10C  H21  H  0  0  N  N  N  -6.833  -20.790   7.441  -8.374   2.635   1.285  H10C  GDZ  48  
GDZ  H10B  H22  H  0  0  N  N  N  -6.759  -19.697   8.864  -7.969   3.346  -0.296  H10B  GDZ  49  
GDZ  H10A  H23  H  0  0  N  N  N  -6.434  -19.052   7.219  -8.957   1.867  -0.212  H10A  GDZ  50  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
GDZ  F4   C3    SING  N  N   1  
GDZ  N11  C5    DOUB  Y  N   2  
GDZ  N11  C9    SING  Y  N   3  
GDZ  C10  C9    SING  N  N   4  
GDZ  C3   C5    SING  Y  N   5  
GDZ  C3   C2    DOUB  Y  N   6  
GDZ  C5   N6    SING  Y  N   7  
GDZ  C9   C8    DOUB  Y  N   8  
GDZ  C2   C1    SING  Y  N   9  
GDZ  N6   C8    SING  Y  N  10  
GDZ  N6   C7    SING  Y  N  11  
GDZ  C1   C7    DOUB  Y  N  12  
GDZ  C1   C19   SING  N  N  13  
GDZ  N18  C19   SING  N  N  14  
GDZ  N18  C16   DOUB  N  N  15  
GDZ  C19  C20   DOUB  N  N  16  
GDZ  C17  C16   SING  N  N  17  
GDZ  C17  C12   DOUB  N  N  18  
GDZ  C16  N15   SING  N  N  19  
GDZ  C20  C21   SING  N  N  20  
GDZ  C12  C13   SING  N  N  21  
GDZ  N15  C21   SING  N  N  22  
GDZ  N15  C14   SING  N  N  23  
GDZ  C21  O22   DOUB  N  N  24  
GDZ  C14  C13   DOUB  N  N  25  
GDZ  C13  N25   SING  N  N  26  
GDZ  C24  N25   SING  N  N  27  
GDZ  C24  C23   SING  N  N  28  
GDZ  N25  C26   SING  N  N  29  
GDZ  C23  N28   SING  N  N  30  
GDZ  C26  C27   SING  N  N  31  
GDZ  N28  C27   SING  N  N  32  
GDZ  N28  C29   SING  N  N  33  
GDZ  C24  H24B  SING  N  N  34  
GDZ  C24  H24A  SING  N  N  35  
GDZ  C23  H23A  SING  N  N  36  
GDZ  C23  H23B  SING  N  N  37  
GDZ  C29  H29A  SING  N  N  38  
GDZ  C29  H29C  SING  N  N  39  
GDZ  C29  H29B  SING  N  N  40  
GDZ  C27  H27A  SING  N  N  41  
GDZ  C27  H27B  SING  N  N  42  
GDZ  C26  H26A  SING  N  N  43  
GDZ  C26  H26B  SING  N  N  44  
GDZ  C14  H14   SING  N  N  45  
GDZ  C12  H12   SING  N  N  46  
GDZ  C17  H17   SING  N  N  47  
GDZ  C20  H20   SING  N  N  48  
GDZ  C7   H7    SING  N  N  49  
GDZ  C2   H2    SING  N  N  50  
GDZ  C8   H8    SING  N  N  51  
GDZ  C10  H10C  SING  N  N  52  
GDZ  C10  H10B  SING  N  N  53  
GDZ  C10  H10A  SING  N  N  54  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
GDZ  InChI             InChI                 1.03   "InChI=1S/C21H21FN6O/c1-14-11-27-12-15(9-17(22)21(27)23-14)18-10-20(29)28-13-16(3-4-19(28)24-18)26-7-5-25(2)6-8-26/h3-4,9-13H,5-8H2,1-2H3"  
GDZ  InChIKey          InChI                 1.03   OCIABPGRNCLBEI-UHFFFAOYSA-N  
GDZ  SMILES_CANONICAL  CACTVS                3.385  "CN1CCN(CC1)C2=CN3C(=O)C=C(N=C3C=C2)c4cn5cc(C)nc5c(F)c4"  
GDZ  SMILES            CACTVS                3.385  "CN1CCN(CC1)C2=CN3C(=O)C=C(N=C3C=C2)c4cn5cc(C)nc5c(F)c4"  
GDZ  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.6  "Cc1cn2cc(cc(c2n1)F)C3=CC(=O)N4C=C(C=CC4=N3)N5CCN(CC5)C"  
GDZ  SMILES            "OpenEye OEToolkits"  2.0.6  "Cc1cn2cc(cc(c2n1)F)C3=CC(=O)N4C=C(C=CC4=N3)N5CCN(CC5)C"  
#
_pdbx_chem_comp_identifier.comp_id          GDZ
_pdbx_chem_comp_identifier.type             "SYSTEMATIC NAME"
_pdbx_chem_comp_identifier.program          "OpenEye OEToolkits"
_pdbx_chem_comp_identifier.program_version  2.0.6
_pdbx_chem_comp_identifier.identifier       "2-(8-fluoranyl-2-methyl-imidazo[1,2-a]pyridin-6-yl)-7-(4-methylpiperazin-1-yl)pyrido[1,2-a]pyrimidin-4-one"
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
GDZ  "Create component"  2018-09-12  EBI   
GDZ  "Initial release"   2019-08-14  RCSB  
GDZ  "Modify synonyms"   2021-03-01  PDBE  
#
_pdbx_chem_comp_synonyms.ordinal     1
_pdbx_chem_comp_synonyms.comp_id     GDZ
_pdbx_chem_comp_synonyms.name        SMN-C5
_pdbx_chem_comp_synonyms.provenance  ?
_pdbx_chem_comp_synonyms.type        ?
##
