data_F7Z
# 
_chem_comp.id                                    F7Z 
_chem_comp.name                                  "(1Z,3E,5S,7R,8R,10R,11R,12S,13R,15S,16R,17S,19Z,26S)-11-ethyl-2-hydroxy-10-methyl-22,27-diaza-14 oxahexacyclo[24.2.1.05,17.07,16.013,15.08,12]nonacosa-1(2),3,19-triene-21,28,29-trione" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C29 H38 N2 O5" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         epoxyikarugamycin 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2023-06-29 
_chem_comp.pdbx_modified_date                    2023-11-10 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        494.622 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     F7Z 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        8JUA 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBC 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
F7Z C12  C1  C 0 1 N N S N N N 17.556 -0.615 19.150 -1.001 -0.962 0.440  C12  F7Z 1  
F7Z C13  C2  C 0 1 N N N N N N 14.282 1.079  24.904 -7.626 0.431  0.162  C13  F7Z 2  
F7Z C14  C3  C 0 1 N N N N N N 14.626 1.765  26.213 -7.965 -0.519 1.313  C14  F7Z 3  
F7Z C16  C4  C 0 1 N N N N N N 17.923 0.859  17.105 0.356  1.048  -0.109 C16  F7Z 4  
F7Z C19  C5  C 0 1 N N N N N N 18.430 -3.554 15.912 2.553  -2.529 -0.247 C19  F7Z 5  
F7Z C20  C6  C 0 1 N N N N N N 17.127 -3.262 16.549 1.484  -2.821 -1.214 C20  F7Z 6  
F7Z C22  C7  C 0 1 N N N N N N 19.972 -3.420 13.102 6.076  -1.716 -0.364 C22  F7Z 7  
F7Z C23  C8  C 0 1 N N N N N N 19.519 -4.567 13.967 4.870  -2.317 0.360  C23  F7Z 8  
F7Z C1   C9  C 0 1 N N R N N N 14.991 1.638  23.665 -6.223 1.004  0.370  C1   F7Z 9  
F7Z C2   C10 C 0 1 N N R N N N 14.296 2.776  22.895 -5.914 2.072  -0.704 C2   F7Z 10 
F7Z C3   C11 C 0 1 N N N N N N 14.651 2.556  21.411 -4.516 1.745  -1.275 C3   F7Z 11 
F7Z C4   C12 C 0 1 N N R N N N 15.659 1.427  21.433 -3.924 0.722  -0.306 C4   F7Z 12 
F7Z C5   C13 C 0 1 N N S N N N 15.208 0.553  22.611 -5.166 -0.086 0.161  C5   F7Z 13 
F7Z C6   C14 C 0 1 N N R N N N 15.719 0.659  20.107 -2.929 -0.243 -0.905 C6   F7Z 14 
F7Z C7   C15 C 0 1 N N R N N N 16.447 -0.697 20.210 -2.474 -1.273 0.125  C7   F7Z 15 
F7Z C11  C16 C 0 1 N N S N N N 16.947 0.363  18.121 -0.480 -0.063 -0.690 C11  F7Z 16 
F7Z C9   C17 C 0 1 N N R N N N 16.267 -0.464 22.759 -4.722 -0.771 1.453  C9   F7Z 17 
F7Z C25  C18 C 0 1 N N N N N N 18.954 -3.118 12.014 6.533  -0.446 0.357  C25  F7Z 18 
F7Z C8   C19 C 0 1 N N S N N N 16.849 -1.021 21.579 -3.282 -1.298 1.413  C8   F7Z 19 
F7Z C10  C20 C 0 1 N N N N N N 16.473 1.466  19.054 -1.698 0.510  -1.424 C10  F7Z 20 
F7Z C15  C21 C 0 1 N N N N N N 12.797 2.924  23.121 -6.962 2.012  -1.817 C15  F7Z 21 
F7Z C17  C22 C 0 1 N N N N N N 17.977 -1.969 18.567 -0.187 -2.251 0.507  C17  F7Z 22 
F7Z O18  O1  O 0 1 N N N N N N 19.525 -3.140 16.345 2.292  -2.147 0.877  O18  F7Z 23 
F7Z C21  C23 C 0 1 N N N N N N 16.936 -2.590 17.684 0.205  -2.690 -0.878 C21  F7Z 24 
F7Z N24  N1  N 0 1 N N N N N N 18.346 -4.260 14.781 3.854  -2.700 -0.651 N24  F7Z 25 
F7Z O26  O2  O 0 1 N N N N N N 19.859 1.574  15.079 2.118  3.092  0.888  O26  F7Z 26 
F7Z C27  C24 C 0 1 N N N N N N 18.958 0.647  14.831 2.583  2.000  0.261  C27  F7Z 27 
F7Z C28  C25 C 0 1 N N N N N N 18.028 0.345  15.900 1.676  0.991  -0.283 C28  F7Z 28 
F7Z C29  C26 C 0 1 N N N N N N 20.105 0.121  12.661 5.053  2.571  0.663  C29  F7Z 29 
F7Z C30  C27 C 0 1 N N N N N N 18.992 -0.016 13.622 3.958  1.767  0.130  C30  F7Z 30 
F7Z N31  N2  N 0 1 N N N N N N 19.905 -0.822 11.726 6.239  2.001  0.381  N31  F7Z 31 
F7Z C32  C28 C 0 1 N N S N N N 18.707 -1.614 11.866 6.008  0.779  -0.395 C32  F7Z 32 
F7Z C33  C29 C 0 1 N N N N N N 18.073 -0.995 13.116 4.510  0.664  -0.570 C33  F7Z 33 
F7Z O34  O3  O 0 1 N N N N N N 21.044 0.922  12.702 4.913  3.612  1.278  O34  F7Z 34 
F7Z O35  O4  O 0 1 N N N N N N 16.998 -1.344 13.563 3.907  -0.194 -1.182 O35  F7Z 35 
F7Z O36  O5  O 0 1 N N N N N N 15.967 -1.790 22.358 -4.428 -2.163 1.431  O36  F7Z 36 
F7Z HC12 H1  H 0 0 N N N N N N 18.438 -0.139 19.603 -0.939 -0.430 1.388  HC12 F7Z 37 
F7Z H13A H2  H 0 0 N N N N N N 13.197 1.173  24.746 -7.660 -0.115 -0.781 H13A F7Z 38 
F7Z H13B H3  H 0 0 N N N N N N 14.548 0.016  24.997 -8.351 1.245  0.137  H13B F7Z 39 
F7Z H14A H4  H 0 0 N N N N N N 14.068 1.291  27.034 -9.000 -0.848 1.220  H14A F7Z 40 
F7Z H14B H5  H 0 0 N N N N N N 15.706 1.672  26.403 -7.303 -1.384 1.277  H14B F7Z 41 
F7Z H14C H6  H 0 0 N N N N N N 14.354 2.829  26.152 -7.833 -0.000 2.263  H14C F7Z 42 
F7Z HC16 H7  H 0 0 N N N N N N 18.573 1.679  17.373 -0.102 1.860  0.428  HC16 F7Z 43 
F7Z HC20 H8  H 0 0 N N N N N N 16.245 -3.629 16.045 1.743  -3.150 -2.213 HC20 F7Z 44 
F7Z H22B H9  H 0 0 N N N N N N 20.932 -3.681 12.633 6.891  -2.440 -0.374 H22B F7Z 45 
F7Z H22A H10 H 0 0 N N N N N N 20.102 -2.526 13.730 5.798  -1.470 -1.389 H22A F7Z 46 
F7Z H23B H11 H 0 0 N N N N N N 19.276 -5.419 13.315 5.181  -3.200 0.918  H23B F7Z 47 
F7Z H23A H12 H 0 0 N N N N N N 20.345 -4.843 14.639 4.448  -1.579 1.042  H23A F7Z 48 
F7Z HC1  H13 H 0 1 N N N N N N 15.979 2.003  23.980 -6.133 1.432  1.368  HC1  F7Z 49 
F7Z HC2  H14 H 0 1 N N N N N N 14.771 3.718  23.207 -5.909 3.064  -0.251 HC2  F7Z 50 
F7Z HC3B H15 H 0 0 N N N N N N 15.093 3.465  20.977 -4.606 1.315  -2.273 HC3B F7Z 51 
F7Z HC3A H16 H 0 0 N N N N N N 13.759 2.271  20.835 -3.898 2.642  -1.303 HC3A F7Z 52 
F7Z HC4  H17 H 0 1 N N N N N N 16.656 1.836  21.654 -3.476 1.235  0.544  HC4  F7Z 53 
F7Z HC5  H18 H 0 1 N N N N N N 14.248 0.074  22.369 -5.484 -0.808 -0.590 HC5  F7Z 54 
F7Z HC6  H19 H 0 1 N N N N N N 14.693 0.482  19.753 -3.398 -0.764 -1.737 HC6  F7Z 55 
F7Z HC7  H20 H 0 1 N N N N N N 15.738 -1.468 19.875 -2.519 -2.257 -0.335 HC7  F7Z 56 
F7Z HC11 H21 H 0 0 N N N N N N 16.085 -0.108 17.626 0.119  -0.654 -1.382 HC11 F7Z 57 
F7Z HC9  H22 H 0 1 N N N N N N 16.930 -0.343 23.629 -5.104 -0.341 2.381  HC9  F7Z 58 
F7Z H25B H23 H 0 0 N N N N N N 18.004 -3.611 12.269 6.140  -0.444 1.374  H25B F7Z 59 
F7Z H25A H24 H 0 0 N N N N N N 19.327 -3.513 11.058 7.622  -0.416 0.388  H25A F7Z 60 
F7Z HC8  H25 H 0 1 N N N N N N 17.911 -1.291 21.679 -2.694 -1.231 2.332  HC8  F7Z 61 
F7Z H10B H26 H 0 0 N N N N N N 17.320 2.013  19.495 -1.592 0.354  -2.497 H10B F7Z 62 
F7Z H10A H27 H 0 0 N N N N N N 15.809 2.174  18.537 -1.795 1.574  -1.209 H10A F7Z 63 
F7Z H15C H28 H 0 0 N N N N N N 12.601 3.078  24.192 -7.935 2.294  -1.416 H15C F7Z 64 
F7Z H15A H29 H 0 0 N N N N N N 12.424 3.788  22.552 -6.684 2.701  -2.615 H15A F7Z 65 
F7Z H15B H30 H 0 0 N N N N N N 12.283 2.012  22.782 -7.012 0.998  -2.214 H15B F7Z 66 
F7Z H17B H31 H 0 0 N N N N N N 18.183 -2.658 19.400 0.711  -2.080 1.100  H17B F7Z 67 
F7Z H17A H32 H 0 0 N N N N N N 18.893 -1.824 17.976 -0.786 -3.032 0.975  H17A F7Z 68 
F7Z HC21 H33 H 0 0 N N N N N N 15.911 -2.480 18.006 -0.563 -2.905 -1.608 HC21 F7Z 69 
F7Z HN24 H34 H 0 0 N N N N N N 17.450 -4.589 14.482 4.090  -3.043 -1.527 HN24 F7Z 70 
F7Z HO26 H35 H 0 0 N N N N N N 20.486 1.606  14.366 1.158  3.179  0.963  HO26 F7Z 71 
F7Z HC28 H36 H 0 0 N N N N N N 17.306 -0.425 15.670 2.094  0.166  -0.852 HC28 F7Z 72 
F7Z HN31 H37 H 0 0 N N N N N N 20.550 -0.967 10.975 7.106  2.344  0.648  HN31 F7Z 73 
F7Z HC32 H38 H 0 0 N N N N N N 18.040 -1.445 11.008 6.490  0.855  -1.370 HC32 F7Z 74 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
F7Z N31 C32  SING N N 1  
F7Z N31 C29  SING N N 2  
F7Z C32 C25  SING N N 3  
F7Z C32 C33  SING N N 4  
F7Z C25 C22  SING N N 5  
F7Z C29 O34  DOUB N N 6  
F7Z C29 C30  SING N N 7  
F7Z C22 C23  SING N N 8  
F7Z C33 O35  DOUB N N 9  
F7Z C33 C30  SING N N 10 
F7Z C30 C27  DOUB N Z 11 
F7Z C23 N24  SING N N 12 
F7Z N24 C19  SING N N 13 
F7Z C27 O26  SING N N 14 
F7Z C27 C28  SING N N 15 
F7Z C28 C16  DOUB N E 16 
F7Z C19 O18  DOUB N N 17 
F7Z C19 C20  SING N N 18 
F7Z C20 C21  DOUB N Z 19 
F7Z C16 C11  SING N N 20 
F7Z C21 C17  SING N N 21 
F7Z C11 C10  SING N N 22 
F7Z C11 C12  SING N N 23 
F7Z C17 C12  SING N N 24 
F7Z C10 C6   SING N N 25 
F7Z C12 C7   SING N N 26 
F7Z C6  C7   SING N N 27 
F7Z C6  C4   SING N N 28 
F7Z C7  C8   SING N N 29 
F7Z C3  C4   SING N N 30 
F7Z C3  C2   SING N N 31 
F7Z C4  C5   SING N N 32 
F7Z C8  O36  SING N N 33 
F7Z C8  C9   SING N N 34 
F7Z O36 C9   SING N N 35 
F7Z C5  C9   SING N N 36 
F7Z C5  C1   SING N N 37 
F7Z C2  C15  SING N N 38 
F7Z C2  C1   SING N N 39 
F7Z C1  C13  SING N N 40 
F7Z C13 C14  SING N N 41 
F7Z C12 HC12 SING N N 42 
F7Z C13 H13A SING N N 43 
F7Z C13 H13B SING N N 44 
F7Z C14 H14A SING N N 45 
F7Z C14 H14B SING N N 46 
F7Z C14 H14C SING N N 47 
F7Z C16 HC16 SING N N 48 
F7Z C20 HC20 SING N N 49 
F7Z C22 H22B SING N N 50 
F7Z C22 H22A SING N N 51 
F7Z C23 H23B SING N N 52 
F7Z C23 H23A SING N N 53 
F7Z C1  HC1  SING N N 54 
F7Z C2  HC2  SING N N 55 
F7Z C3  HC3B SING N N 56 
F7Z C3  HC3A SING N N 57 
F7Z C4  HC4  SING N N 58 
F7Z C5  HC5  SING N N 59 
F7Z C6  HC6  SING N N 60 
F7Z C7  HC7  SING N N 61 
F7Z C11 HC11 SING N N 62 
F7Z C9  HC9  SING N N 63 
F7Z C25 H25B SING N N 64 
F7Z C25 H25A SING N N 65 
F7Z C8  HC8  SING N N 66 
F7Z C10 H10B SING N N 67 
F7Z C10 H10A SING N N 68 
F7Z C15 H15C SING N N 69 
F7Z C15 H15A SING N N 70 
F7Z C15 H15B SING N N 71 
F7Z C17 H17B SING N N 72 
F7Z C17 H17A SING N N 73 
F7Z C21 HC21 SING N N 74 
F7Z N24 HN24 SING N N 75 
F7Z O26 HO26 SING N N 76 
F7Z C28 HC28 SING N N 77 
F7Z N31 HN31 SING N N 78 
F7Z C32 HC32 SING N N 79 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
F7Z InChI            InChI                1.06  "InChI=1S/C29H38N2O5/c1-3-16-14(2)12-18-19-13-15-9-10-21(32)25-26(34)20(31-29(25)35)7-5-11-30-22(33)8-4-6-17(15)24(19)28-27(36-28)23(16)18/h4,8-10,14-20,23-24,27-28,32H,3,5-7,11-13H2,1-2H3,(H,30,33)(H,31,35)/b8-4-,10-9+,25-21-/t14-,15-,16-,17+,18-,19-,20+,23+,24-,27-,28+/m1/s1" 
F7Z InChIKey         InChI                1.06  XVOOQLPJKAEVAZ-CGBNOSMTSA-N                                                                                                                                                                                                                                                            
F7Z SMILES_CANONICAL CACTVS               3.385 "CC[C@@H]1[C@H](C)C[C@@H]2[C@H]3C[C@H]4/C=C/C(=C5/C(=O)N[C@@H](CCCNC(=O)\C=C/C[C@@H]4[C@H]3[C@@H]6O[C@@H]6[C@@H]12)C5=O)O"                                                                                                                                                             
F7Z SMILES           CACTVS               3.385 "CC[CH]1[CH](C)C[CH]2[CH]3C[CH]4C=CC(=C5C(=O)N[CH](CCCNC(=O)C=CC[CH]4[CH]3[CH]6O[CH]6[CH]12)C5=O)O"                                                                                                                                                                                    
F7Z SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CC[C@@H]1[C@@H](C[C@H]2[C@H]1[C@@H]3[C@@H](O3)[C@H]4[C@@H]2C[C@@H]/5[C@@H]4C/C=C\C(=O)NCCC[C@H]6C(=O)/C(=C(\C=C5)/O)/C(=O)N6)C"                                                                                                                                                       
F7Z SMILES           "OpenEye OEToolkits" 2.0.7 "CCC1C(CC2C1C3C(O3)C4C2CC5C4CC=CC(=O)NCCCC6C(=O)C(=C(C=C5)O)C(=O)N6)C"                                                                                                                                                                                                                 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
F7Z "Create component" 2023-06-29 PDBC 
F7Z "Initial release"  2023-11-15 RCSB 
# 
_pdbx_chem_comp_synonyms.ordinal      1 
_pdbx_chem_comp_synonyms.comp_id      F7Z 
_pdbx_chem_comp_synonyms.name         epoxyikarugamycin 
_pdbx_chem_comp_synonyms.provenance   AUTHOR 
_pdbx_chem_comp_synonyms.type         ? 
# 
